Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:81120693..81123298-chr14:81125309..81128150,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10498547	0.90[ASN][1000 genomes]
rs11159470	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11159471	0.90[ASN][1000 genomes]
rs12589019	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12589109	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17519	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1871458	0.90[ASN][1000 genomes]
rs34201956	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4903927	0.83[EUR][1000 genomes]
rs4903930	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6574592	0.82[ASN][1000 genomes]
rs66523962	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7141390	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7142417	0.83[ASN][1000 genomes]
rs71430713	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7144036	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7144975	0.81[EUR][1000 genomes]
rs7152126	0.85[ASN][1000 genomes]
rs7156452	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7158869	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7159302	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8003492	0.82[ASN][1000 genomes]
rs8006458	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs8007955	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8008167	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs8013202	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv565290	chr14:81085129-81230117	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1039554	chr14:81113167-81156335	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
4	nsv1051964	chr14:81113167-81156847	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81106200-81135400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:81108200-81145800	Weak transcription	Fetal Thymus	thymus
3	chr14:81110600-81124600	Weak transcription	Dnd41	blood
4	chr14:81110800-81124400	Weak transcription	Brain Substantia Nigra	brain
5	chr14:81120800-81130600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr14:81121200-81122600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr14:81121800-81122400	Enhancers	HUVEC	blood vessel

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