Variant report

Variant	rs4951504
Chromosome Location	chr1:211267664-211267665
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11119677	0.98[ASN][1000 genomes]
rs11119679	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12027884	0.99[ASN][1000 genomes]
rs1416065	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2211038	0.94[ASN][1000 genomes]
rs4511184	0.86[ASN][1000 genomes]
rs4620600	0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4951499	0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4951502	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4951716	0.96[ASN][1000 genomes]
rs6685217	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211250000-211271000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr1:211256400-211285400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr1:211256800-211276600	Weak transcription	Brain Angular Gyrus	brain
4	chr1:211256800-211277000	Weak transcription	Brain Cingulate Gyrus	brain
5	chr1:211256800-211282400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr1:211263400-211273000	Weak transcription	HSMMtube	muscle
7	chr1:211263800-211267800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr1:211264400-211277400	Weak transcription	Brain Anterior Caudate	brain
9	chr1:211265400-211277200	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr1:211266400-211280200	Weak transcription	Pancreas	Pancrea
11	chr1:211267000-211269200	Strong transcription	HSMM	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links