Variant report

Variant	rs4951705
Chromosome Location	chr1:211193240-211193241
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10494930	1.00[CHB][hapmap];0.88[JPT][hapmap];0.82[ASN][1000 genomes]
rs12082952	1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs17017087	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs17017120	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2062674	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs4072437	0.82[AMR][1000 genomes]
rs4951489	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs4951494	0.82[AMR][1000 genomes]
rs4951684	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs4951685	0.82[ASN][1000 genomes]
rs4951690	0.86[ASN][1000 genomes]
rs4951691	0.86[ASN][1000 genomes]
rs4951692	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs4951696	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs4951703	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4951714	0.82[AMR][1000 genomes]
rs6671566	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7522148	1.00[YRI][hapmap]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211181800-211193800	Weak transcription	Brain Anterior Caudate	brain
2	chr1:211182800-211228600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr1:211184800-211198600	Weak transcription	Brain Hippocampus Middle	brain
4	chr1:211185200-211194000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr1:211187000-211198200	Weak transcription	Brain Angular Gyrus	brain
6	chr1:211187600-211198200	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr1:211190600-211198800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr1:211192400-211194800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr1:211192400-211194800	Weak transcription	A549	lung
10	chr1:211192400-211198400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr1:211192600-211198400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr1:211192600-211199800	Weak transcription	Brain Substantia Nigra	brain
13	chr1:211192600-211209000	Weak transcription	HSMMtube	muscle
14	chr1:211192800-211193800	Weak transcription	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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