The 2.0 version of rSNPBase

Variant report

Variant rs512361
Chromosome Location chr1:93731305-93731306
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93647000-93756400 Weak transcription Gastric stomach
2 chr1:93647200-93757600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr1:93691200-93732400 Weak transcription HUVEC blood vessel
4 chr1:93692200-93787800 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:93720000-93762000 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr1:93721200-93731400 Weak transcription NH-A brain
7 chr1:93724200-93731800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:93725200-93732600 Weak transcription NHDF-Ad bronchial
9 chr1:93726400-93731600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:93726400-93731800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
11 chr1:93726400-93732000 Weak transcription Right Ventricle heart
12 chr1:93726600-93731800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
13 chr1:93726600-93731800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
14 chr1:93726800-93731800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
15 chr1:93727000-93731800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:93727800-93731800 Weak transcription NHEK skin
17 chr1:93727800-93741600 Weak transcription Fetal Kidney kidney
18 chr1:93728600-93731600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:93728600-93738400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:93728600-93741000 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr1:93728600-93741400 Weak transcription Duodenum Mucosa Duodenum
22 chr1:93728600-93751400 Weak transcription Adipose Nuclei Adipose
23 chr1:93728600-93754800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr1:93728600-93764400 Weak transcription Psoas Muscle Psoas
25 chr1:93728600-93769400 Weak transcription Rectal Smooth Muscle rectum
26 chr1:93728600-93770400 Weak transcription HSMM muscle
27 chr1:93728800-93731600 Strong transcription Primary neutrophils fromperipheralblood blood
28 chr1:93728800-93732200 Weak transcription HMEC breast
29 chr1:93728800-93732600 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr1:93728800-93732800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:93728800-93736000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:93728800-93740200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:93728800-93740400 Weak transcription Liver Liver
34 chr1:93728800-93740400 Weak transcription Fetal Intestine Large intestine
35 chr1:93728800-93746600 Weak transcription Aorta Aorta
36 chr1:93728800-93751600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr1:93728800-93751800 Weak transcription Placenta Placenta
38 chr1:93728800-93752600 Weak transcription Brain Hippocampus Middle brain
39 chr1:93728800-93752600 Weak transcription Fetal Stomach stomach
40 chr1:93728800-93753800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr1:93728800-93754800 Weak transcription Ovary ovary
42 chr1:93728800-93755000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:93728800-93755000 Weak transcription Left Ventricle heart
44 chr1:93728800-93755000 Weak transcription Stomach Smooth Muscle stomach
45 chr1:93728800-93778200 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr1:93729000-93731400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:93729000-93731600 Strong transcription Primary T cells from cord blood blood
48 chr1:93729000-93731800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:93729000-93739000 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr1:93729000-93745600 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015