Variant report

Variant	rs528765587
Chromosome Location	chr1:211026845-211026846
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832503	chr1:210948760-211103163	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv520509	chr1:211021787-211041590	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv3385739	chr1:211026554-211027066	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211022600-211027200	Enhancers	Brain Substantia Nigra	brain
2	chr1:211023000-211027000	Enhancers	Brain Inferior Temporal Lobe	brain
3	chr1:211023400-211027000	Enhancers	Brain Anterior Caudate	brain
4	chr1:211024800-211027000	Enhancers	Brain Cingulate Gyrus	brain
5	chr1:211024800-211035400	Weak transcription	HSMM	muscle
6	chr1:211024800-211046800	Weak transcription	HSMMtube	muscle
7	chr1:211026200-211029800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr1:211026800-211027000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr1:211026800-211030400	Weak transcription	Brain Hippocampus Middle	brain
10	chr1:211026800-211030600	Weak transcription	Brain Angular Gyrus	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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