The 2.0 version of rSNPBase

Variant report

Variant rs529807972
Chromosome Location chr11:47166453-47166454
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:47143600-47175200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr11:47145200-47174800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr11:47149000-47170400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr11:47149400-47173200 Weak transcription Primary B cells from peripheral blood blood
5 chr11:47149600-47170400 Weak transcription Esophagus oesophagus
6 chr11:47151200-47170600 Weak transcription Gastric stomach
7 chr11:47153000-47174400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr11:47153400-47174800 Weak transcription Primary hematopoietic stem cells blood
9 chr11:47155400-47170200 Weak transcription Stomach Mucosa stomach
10 chr11:47155600-47170200 Weak transcription Small Intestine intestine
11 chr11:47155600-47174400 Weak transcription Fetal Brain Male brain
12 chr11:47157600-47170400 Weak transcription Colonic Mucosa Colon
13 chr11:47157800-47169800 Weak transcription Brain Germinal Matrix brain
14 chr11:47158000-47174800 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr11:47158800-47175000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr11:47159400-47171200 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr11:47159600-47174000 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr11:47159800-47174200 Weak transcription Primary B cells from cord blood blood
19 chr11:47160000-47169200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr11:47160000-47169200 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr11:47160000-47169600 Weak transcription Lung lung
22 chr11:47160000-47170400 Weak transcription Adipose Nuclei Adipose
23 chr11:47160000-47171000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr11:47160000-47174000 Weak transcription Primary T cells fromperipheralblood blood
25 chr11:47160000-47176400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr11:47160200-47169800 Weak transcription HepG2 liver
27 chr11:47160200-47170400 Weak transcription Fetal Brain Female brain
28 chr11:47160200-47174000 Weak transcription Primary T cells from cord blood blood
29 chr11:47160200-47174000 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr11:47160200-47174200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr11:47160400-47169600 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr11:47160400-47170600 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr11:47161400-47169800 Weak transcription Duodenum Mucosa Duodenum
34 chr11:47161600-47169600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr11:47161600-47170000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr11:47161600-47170400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr11:47161600-47170400 Weak transcription Fetal Thymus thymus
38 chr11:47161600-47173800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr11:47161600-47174400 Weak transcription Spleen Spleen
40 chr11:47161600-47174600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr11:47161600-47176000 Weak transcription Dnd41 blood
42 chr11:47161800-47169000 Weak transcription Thymus Thymus
43 chr11:47161800-47169400 Weak transcription Fetal Intestine Large intestine
44 chr11:47161800-47170200 Weak transcription Brain Angular Gyrus brain
45 chr11:47161800-47170600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr11:47161800-47174000 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr11:47162400-47168800 Weak transcription Fetal Intestine Small intestine
48 chr11:47162800-47170200 Weak transcription Hela-S3 cervix
49 chr11:47164000-47166600 Enhancers Fetal Muscle Leg muscle
50 chr11:47164200-47175000 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015