Variant report

Variant	rs533974125
Chromosome Location	chr4:81488150-81488151
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1002776	chr4:81480374-81802614	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv537154	chr4:81480374-81802614	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81487400-81488400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr4:81487600-81488200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr4:81487600-81488200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr4:81487600-81488200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr4:81487600-81488200	Active TSS	Pancreatic Islets	Pancreatic Islet
6	chr4:81487600-81488200	Active TSS	Stomach Smooth Muscle	stomach
7	chr4:81487600-81488200	Active TSS	HMEC	breast
8	chr4:81487600-81488400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr4:81487600-81488400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr4:81487600-81488400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr4:81487600-81488400	Active TSS	Duodenum Mucosa	Duodenum
12	chr4:81487600-81488400	Active TSS	Ovary	ovary
13	chr4:81487800-81488200	Active TSS	Duodenum Smooth Muscle	Duodenum
14	chr4:81487800-81488200	Active TSS	Rectal Mucosa Donor 29	rectum
15	chr4:81487800-81488200	Active TSS	Rectal Smooth Muscle	rectum
16	chr4:81487800-81488200	Active TSS	NHDF-Ad	bronchial
17	chr4:81487800-81488400	Active TSS	Osteobl	bone

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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