| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv949349 |
chr11:56371633-56593610 |
Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
18 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1048328 |
chr11:56471984-56649908 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
esv2830406 |
chr11:56481955-56650124 |
Enhancers ZNF genes & repeats Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv468577 |
chr11:56503728-56704042 |
Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv555101 |
chr11:56503728-56704042 |
Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv519069 |
chr11:56590550-56592445 |
Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved
Feedback
Last update: Aug 31, 2015