Variant report

Variant	rs534696120
Chromosome Location	chr11:120583953-120583954
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1054407	chr11:120535570-120630114	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv1053607	chr11:120540795-120802006	Enhancers Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	esv3693392	chr11:120549745-120628012	Enhancers Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv1041465	chr11:120582595-120630114	Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
5	nsv541180	chr11:120582595-120630114	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
6	nsv1038264	chr11:120582595-120799335	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
7	nsv541181	chr11:120582595-120799335	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:120579200-120585200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr11:120580000-120585800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:120581000-120585200	Enhancers	Fetal Kidney	kidney
4	chr11:120581000-120585800	Enhancers	Ovary	ovary
5	chr11:120581800-120585800	Weak transcription	Rectal Smooth Muscle	rectum
6	chr11:120582000-120584800	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr11:120582000-120585000	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr11:120582200-120584000	Weak transcription	Lung	lung
9	chr11:120582200-120585600	Weak transcription	Brain Angular Gyrus	brain
10	chr11:120582200-120585600	Weak transcription	Brain Inferior Temporal Lobe	brain
11	chr11:120582200-120585800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr11:120582200-120587200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
13	chr11:120582200-120587200	Weak transcription	Colon Smooth Muscle	Colon
14	chr11:120582200-120588800	Weak transcription	Brain Cingulate Gyrus	brain
15	chr11:120582400-120585600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr11:120582800-120584800	Weak transcription	Brain Substantia Nigra	brain
17	chr11:120582800-120585800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr11:120583000-120584000	Weak transcription	HUES6 Cell Line	embryonic stem cell
19	chr11:120583000-120584000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr11:120583000-120584000	Weak transcription	Fetal Intestine Large	intestine
21	chr11:120583000-120584200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr11:120583000-120585800	Weak transcription	Brain Hippocampus Middle	brain
23	chr11:120583000-120585800	Weak transcription	Colonic Mucosa	Colon
24	chr11:120583200-120584000	Weak transcription	Right Atrium	heart
25	chr11:120583200-120585600	Weak transcription	Adipose Nuclei	Adipose
26	chr11:120583400-120584400	Enhancers	Fetal Lung	lung
27	chr11:120583600-120585800	Weak transcription	NHLF	lung
28	chr11:120583800-120584400	Enhancers	Fetal Stomach	stomach
29	chr11:120583800-120585000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr11:120583800-120585000	Weak transcription	GM12878-XiMat	blood
31	chr11:120583800-120585200	Weak transcription	HepG2	liver
32	chr11:120583800-120585600	Weak transcription	NHDF-Ad	bronchial
33	chr11:120583800-120585800	Enhancers	Fetal Intestine Small	intestine

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