Variant report

Variant rs534865477
Chromosome Location chr20:24412978-24412979
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:17 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:24407600-24413000 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr20:24410800-24413600 Enhancers iPS-18 Cell Line embryonic stem cell
3 chr20:24411800-24413600 Enhancers Stomach Mucosa stomach
4 chr20:24412200-24413600 Enhancers Rectal Mucosa Donor 31 rectum
5 chr20:24412400-24413000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr20:24412400-24413400 Enhancers Fetal Intestine Small intestine
7 chr20:24412400-24413400 Enhancers Fetal Lung lung
8 chr20:24412400-24413400 Enhancers HepG2 liver
9 chr20:24412400-24413600 Enhancers Fetal Intestine Large intestine
10 chr20:24412400-24423400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr20:24412600-24413000 Enhancers Fetal Stomach stomach
12 chr20:24412600-24413200 Enhancers HUES64 Cell Line embryonic stem cell
13 chr20:24412600-24423600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr20:24412800-24413000 Flanking Active TSS Duodenum Mucosa Duodenum
15 chr20:24412800-24413000 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
16 chr20:24412800-24413200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr20:24412800-24417000 Weak transcription Cortex derived primary cultured neurospheres brain

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