Variant report

Variant	rs538199543
Chromosome Location	chr8:63449240-63449241
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv831339	chr8:63312449-63501127	Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv890959	chr8:63449156-63515522	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63444600-63449400	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr8:63444800-63458200	Weak transcription	Fetal Brain Female	brain
3	chr8:63446200-63450400	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr8:63448200-63450600	Enhancers	Fetal Intestine Large	intestine
5	chr8:63448800-63449800	Enhancers	Fetal Lung	lung
6	chr8:63449000-63450200	Enhancers	Fetal Intestine Small	intestine
7	chr8:63449000-63451400	Enhancers	Colon Smooth Muscle	Colon
8	chr8:63449200-63449800	Enhancers	Duodenum Smooth Muscle	Duodenum
9	chr8:63449200-63450800	Enhancers	Fetal Stomach	stomach
10	chr8:63449200-63451000	Enhancers	Brain Germinal Matrix	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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