Variant report

Variant	rs538417968
Chromosome Location	chr14:32923822-32923823
allele	-/GACCTTCCTTCC
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:32901776..32904730-chr14:32922169..32924745,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000151320	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758352	chr14:32858480-33016442	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2759978	chr14:32858480-33016442	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	esv3521784	chr14:32923770-32924276	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv3521786	chr14:32923771-32924218	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32919200-32926400	Weak transcription	NHDF-Ad	bronchial
2	chr14:32919600-32926800	Weak transcription	Aorta	Aorta
3	chr14:32919800-32926200	Weak transcription	Brain Cingulate Gyrus	brain
4	chr14:32920800-32926200	Weak transcription	Brain Anterior Caudate	brain
5	chr14:32920800-32926600	Weak transcription	Brain Hippocampus Middle	brain
6	chr14:32920800-32930200	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr14:32921600-32926400	Weak transcription	Brain Substantia Nigra	brain
8	chr14:32923600-32924400	Weak transcription	Rectal Smooth Muscle	rectum
9	chr14:32923800-32924000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr14:32923800-32925000	Weak transcription	Fetal Heart	heart
11	chr14:32923800-32926200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr14:32923800-32926200	Weak transcription	Fetal Lung	lung
13	chr14:32923800-32926400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr14:32923800-32926400	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr14:32923800-32926400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr14:32923800-32926400	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr14:32923800-32926400	Weak transcription	Stomach Smooth Muscle	stomach
18	chr14:32923800-32926400	Weak transcription	Osteobl	bone
19	chr14:32923800-32927200	Weak transcription	HSMM	muscle
20	chr14:32923800-32927400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr14:32923800-32927800	Weak transcription	Colon Smooth Muscle	Colon
22	chr14:32923800-32929600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr14:32923800-32929600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr14:32923800-32936400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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