The 2.0 version of rSNPBase

Variant report

Variant rs538705088
Chromosome Location chr10:119095823-119095824
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:119041400-119101200 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr10:119049800-119100600 Weak transcription Stomach Smooth Muscle stomach
3 chr10:119049800-119101400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr10:119049800-119102400 Weak transcription Rectal Smooth Muscle rectum
5 chr10:119050000-119101600 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr10:119063800-119113200 Weak transcription Fetal Thymus thymus
7 chr10:119064600-119098000 Weak transcription HMEC breast
8 chr10:119066800-119111600 Weak transcription Colonic Mucosa Colon
9 chr10:119069400-119104400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr10:119071600-119099200 Weak transcription NH-A brain
11 chr10:119071600-119106000 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr10:119071800-119099200 Weak transcription Hela-S3 cervix
13 chr10:119072000-119111200 Weak transcription Aorta Aorta
14 chr10:119076200-119099800 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr10:119076400-119104800 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr10:119078000-119101400 Weak transcription NHDF-Ad bronchial
17 chr10:119078200-119104400 Weak transcription HSMM muscle
18 chr10:119079000-119101800 Weak transcription NHEK skin
19 chr10:119079400-119099200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr10:119082200-119099800 Weak transcription H9 Cell Line embryonic stem cell
21 chr10:119082400-119118600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr10:119082600-119102000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr10:119083400-119104600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr10:119083600-119098800 Weak transcription Colon Smooth Muscle Colon
25 chr10:119085600-119102000 Weak transcription Pancreas Pancrea
26 chr10:119086000-119102000 Weak transcription Gastric stomach
27 chr10:119086200-119099200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr10:119086400-119097200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr10:119086400-119099000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr10:119086800-119098800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr10:119086800-119099200 Weak transcription Duodenum Mucosa Duodenum
32 chr10:119087000-119097800 Weak transcription Fetal Kidney kidney
33 chr10:119087000-119100600 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr10:119087600-119100000 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr10:119087800-119097200 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr10:119088000-119101400 Weak transcription Stomach Mucosa stomach
37 chr10:119088600-119100000 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr10:119089000-119096800 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr10:119089800-119102000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr10:119092400-119099400 Weak transcription Fetal Heart heart
41 chr10:119093200-119096200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
42 chr10:119093400-119096000 Strong transcription K562 blood
43 chr10:119093600-119101000 Strong transcription Dnd41 blood
44 chr10:119093800-119098200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr10:119094000-119098800 Weak transcription Fetal Intestine Small intestine
46 chr10:119094000-119098800 Weak transcription Left Ventricle heart
47 chr10:119094000-119099200 Weak transcription Small Intestine intestine
48 chr10:119094000-119101400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr10:119094000-119102000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr10:119094000-119113200 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015