The 2.0 version of rSNPBase

Variant report

Variant rs538865296
Chromosome Location chr10:224680-224681
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:194200-228200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr10:200000-228000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr10:200400-226800 Weak transcription HSMM muscle
4 chr10:200400-230400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr10:207200-226800 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr10:208200-293000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr10:209800-225800 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr10:209800-226600 Weak transcription Liver Liver
9 chr10:210800-224800 Weak transcription Ovary ovary
10 chr10:212800-226400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr10:213800-226000 Weak transcription Dnd41 blood
12 chr10:215200-237600 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr10:215400-227000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr10:215600-226600 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr10:216200-227800 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr10:217600-226000 Weak transcription Primary T cells fromperipheralblood blood
17 chr10:217800-225800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr10:218200-227000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr10:218200-227200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr10:218200-238000 Weak transcription Pancreas Pancrea
21 chr10:218200-242800 Weak transcription Fetal Brain Male brain
22 chr10:218600-226400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr10:218600-227400 Weak transcription Stomach Smooth Muscle stomach
24 chr10:219000-226000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr10:219400-225800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr10:219600-226200 Weak transcription Primary monocytes fromperipheralblood blood
27 chr10:220000-226600 Weak transcription Brain Anterior Caudate brain
28 chr10:220200-227400 Weak transcription HUVEC blood vessel
29 chr10:220600-280800 Weak transcription Gastric stomach
30 chr10:222200-225800 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr10:222200-226200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr10:222600-226800 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr10:223000-229400 Weak transcription Brain Inferior Temporal Lobe brain
34 chr10:223000-237800 Weak transcription Psoas Muscle Psoas
35 chr10:223200-224800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr10:223200-227000 Weak transcription Fetal Muscle Leg muscle
37 chr10:223400-228000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr10:223600-225800 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr10:223600-242800 Weak transcription Aorta Aorta
40 chr10:224000-226400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr10:224000-226600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr10:224200-226400 Weak transcription Fetal Intestine Large intestine
43 chr10:224200-226600 Weak transcription A549 lung
44 chr10:224200-227200 Weak transcription Primary T cells from cord blood blood
45 chr10:224200-227200 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr10:224200-227800 Weak transcription Brain Germinal Matrix brain
47 chr10:224200-228000 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr10:224200-229600 Weak transcription Primary hematopoietic stem cells blood
49 chr10:224200-250000 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr10:224400-225200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015