Variant report

Variant rs539284876
Chromosome Location chr4:56934560-56934561
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56916400-56936200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr4:56917200-56934600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr4:56922000-56935600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr4:56922200-56935000 Weak transcription Primary hematopoietic stem cells blood
5 chr4:56922800-56934800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr4:56923800-56936400 Weak transcription Fetal Intestine Small intestine
7 chr4:56923800-56936800 Weak transcription Fetal Intestine Large intestine
8 chr4:56926800-56936200 Weak transcription Fetal Kidney kidney
9 chr4:56927200-56939800 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr4:56929800-56934800 Weak transcription Fetal Brain Female brain
11 chr4:56930000-56935000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr4:56931200-56943600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr4:56931800-56934600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr4:56932800-56934600 Enhancers Brain Germinal Matrix brain
15 chr4:56933400-56935400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr4:56933800-56935000 Enhancers Placenta Placenta
17 chr4:56934000-56934600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr4:56934000-56934800 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr4:56934000-56934800 Enhancers HepG2 liver
20 chr4:56934000-56935000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
21 chr4:56934200-56935400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr4:56934200-56935600 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr4:56934200-56937600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr4:56934400-56935200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain

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