Variant report

Variant rs539310517
Chromosome Location chr3:46735187-46735188
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46734000-46735600 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:46734000-46735600 Active TSS Breast Myoepithelial Primary Cells Breast
3 chr3:46734000-46735600 Active TSS Colon Smooth Muscle Colon
4 chr3:46734000-46736200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
5 chr3:46734200-46735200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr3:46734200-46735200 Flanking Active TSS Primary hematopoietic stem cells blood
7 chr3:46734200-46735200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
8 chr3:46734200-46735200 Flanking Active TSS Placenta Amnion Placenta Amnion
9 chr3:46734200-46735200 Active TSS NHDF-Ad bronchial
10 chr3:46734200-46735400 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr3:46734200-46735400 Active TSS HMEC breast
12 chr3:46734200-46735400 Active TSS NHEK skin
13 chr3:46734200-46735600 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
14 chr3:46734200-46735600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
15 chr3:46734200-46735600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
16 chr3:46734200-46735600 Active TSS Psoas Muscle Psoas
17 chr3:46734200-46735800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr3:46734200-46735800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr3:46734200-46735800 Flanking Active TSS Placenta Placenta
20 chr3:46734200-46736000 Flanking Active TSS Stomach Smooth Muscle stomach
21 chr3:46734400-46735200 Active TSS ES-WA7 Cell Line embryonic stem cell
22 chr3:46734400-46735200 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
23 chr3:46734400-46735200 Active TSS Fetal Kidney kidney
24 chr3:46734400-46735200 Active TSS Small Intestine intestine
25 chr3:46734400-46735400 Active TSS Aorta Aorta
26 chr3:46734400-46735400 Active TSS Esophagus oesophagus
27 chr3:46734400-46735400 Active TSS Right Atrium heart
28 chr3:46734400-46735600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
29 chr3:46734400-46735600 Active TSS Pancreatic Islets Pancreatic Islet
30 chr3:46734400-46735600 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
31 chr3:46734400-46735600 Active TSS Ovary ovary
32 chr3:46734400-46735800 Flanking Active TSS Primary monocytes fromperipheralblood blood
33 chr3:46734400-46735800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
34 chr3:46734600-46735200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr3:46734600-46735200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
36 chr3:46734600-46735400 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
37 chr3:46734600-46735400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr3:46734600-46735400 Active TSS Colonic Mucosa Colon
39 chr3:46734600-46735400 Active TSS Gastric stomach
40 chr3:46734600-46735400 Active TSS Left Ventricle heart
41 chr3:46734600-46735400 Active TSS Right Ventricle heart
42 chr3:46734600-46735400 Active TSS Sigmoid Colon Sigmoid Colon
43 chr3:46734600-46735400 Active TSS Hela-S3 cervix
44 chr3:46734600-46735600 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
45 chr3:46734600-46735600 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
46 chr3:46734600-46735600 Active TSS Primary T helper memory cells from peripheral blood 2 blood
47 chr3:46734600-46735600 Active TSS Brain Angular Gyrus brain
48 chr3:46734600-46735800 Active TSS A549 lung
49 chr3:46734800-46735200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr3:46734800-46735200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links