The 2.0 version of rSNPBase

Variant report

Variant rs540285831
Chromosome Location chr15:56256130-56256131
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56229400-56259000 Weak transcription Ovary ovary
2 chr15:56229400-56259400 Weak transcription Small Intestine intestine
3 chr15:56229600-56282600 Weak transcription NHLF lung
4 chr15:56229800-56259000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr15:56231400-56284200 Weak transcription Stomach Smooth Muscle stomach
6 chr15:56231600-56260000 Weak transcription Left Ventricle heart
7 chr15:56232600-56257200 Weak transcription Primary T cells from cord blood blood
8 chr15:56236000-56258200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr15:56236000-56259000 Weak transcription Fetal Muscle Trunk muscle
10 chr15:56236000-56261200 Weak transcription Esophagus oesophagus
11 chr15:56236200-56257000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr15:56236200-56257000 Weak transcription Aorta Aorta
13 chr15:56236200-56276000 Weak transcription HUVEC blood vessel
14 chr15:56236600-56257000 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr15:56236800-56257000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr15:56236800-56282800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr15:56238200-56257000 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr15:56241000-56261400 Weak transcription Pancreas Pancrea
19 chr15:56243000-56257000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr15:56243200-56256400 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr15:56243200-56256400 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr15:56243200-56276200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr15:56243400-56257000 Weak transcription Primary hematopoietic stem cells blood
24 chr15:56244600-56257800 Weak transcription Fetal Brain Male brain
25 chr15:56247400-56257000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr15:56247600-56257400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr15:56248200-56285200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr15:56250000-56266600 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr15:56250600-56257200 Weak transcription Fetal Stomach stomach
30 chr15:56251200-56258200 Weak transcription A549 lung
31 chr15:56251600-56281600 Weak transcription Osteobl bone
32 chr15:56252200-56261800 Weak transcription Spleen Spleen
33 chr15:56252400-56261200 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr15:56253200-56256400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr15:56253200-56256800 Weak transcription Lung lung
36 chr15:56253200-56259000 Weak transcription Duodenum Mucosa Duodenum
37 chr15:56253200-56261200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr15:56253200-56261400 Weak transcription HSMMtube muscle
39 chr15:56253400-56257000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr15:56253400-56257000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr15:56253400-56257000 Weak transcription HSMM muscle
42 chr15:56253400-56259000 Weak transcription Adipose Nuclei Adipose
43 chr15:56253400-56261200 Weak transcription Gastric stomach
44 chr15:56253400-56261600 Weak transcription Placenta Placenta
45 chr15:56253400-56261800 Weak transcription HMEC breast
46 chr15:56253600-56257000 Weak transcription Fetal Intestine Large intestine
47 chr15:56253600-56257000 Weak transcription NHEK skin
48 chr15:56253600-56282400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr15:56253800-56256800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr15:56254000-56258200 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015