The 2.0 version of rSNPBase

Variant report

Variant rs540861237
Chromosome Location chr9:15228372-15228373
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:15163000-15233000 Weak transcription H9 Cell Line embryonic stem cell
2 chr9:15171000-15228600 Weak transcription Stomach Mucosa stomach
3 chr9:15182200-15229200 Weak transcription Gastric stomach
4 chr9:15192200-15229200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr9:15193400-15249600 Weak transcription Colonic Mucosa Colon
6 chr9:15206000-15229200 Weak transcription Ovary ovary
7 chr9:15210000-15231800 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr9:15211400-15229000 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr9:15211400-15229000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr9:15220000-15229200 Weak transcription Fetal Kidney kidney
11 chr9:15220000-15229200 Weak transcription Small Intestine intestine
12 chr9:15221200-15229200 Weak transcription Aorta Aorta
13 chr9:15221200-15242200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr9:15221800-15231200 Weak transcription Fetal Intestine Small intestine
15 chr9:15221800-15233000 Weak transcription Osteobl bone
16 chr9:15221800-15242800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr9:15222600-15230200 Weak transcription Left Ventricle heart
18 chr9:15223400-15258200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr9:15223600-15228600 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr9:15223600-15232000 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr9:15223600-15232600 Weak transcription Fetal Stomach stomach
22 chr9:15223800-15235200 Weak transcription Fetal Lung lung
23 chr9:15224400-15242800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr9:15224600-15228400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr9:15224600-15228400 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr9:15224600-15229200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr9:15224600-15229200 Weak transcription Duodenum Mucosa Duodenum
28 chr9:15224600-15229200 Weak transcription Esophagus oesophagus
29 chr9:15224600-15229200 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr9:15224600-15231200 Weak transcription Primary T cells fromperipheralblood blood
31 chr9:15224600-15231800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr9:15224600-15232200 Weak transcription Fetal Intestine Large intestine
33 chr9:15224600-15235200 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr9:15224600-15243600 Weak transcription Stomach Smooth Muscle stomach
35 chr9:15224600-15244400 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr9:15224800-15232800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr9:15224800-15235000 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr9:15225000-15229200 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr9:15225000-15231800 Weak transcription Primary T cells from cord blood blood
40 chr9:15225400-15231800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr9:15226000-15229200 Weak transcription Primary B cells from peripheral blood blood
42 chr9:15226000-15229200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr9:15226800-15228800 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015