Variant report

Variant	rs541234147
Chromosome Location	chr6:101934865-101934866
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:41 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020400	chr6:101172705-101981665	Weak transcription Bivalent/Poised TSS Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv538390	chr6:101172705-101981665	Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
3	nsv886459	chr6:101880376-101951502	Weak transcription Enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv886460	chr6:101890395-101951502	Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	nsv886461	chr6:101916765-101948788	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv886462	chr6:101916765-101951502	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv604277	chr6:101922699-101941632	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv886463	chr6:101922699-101951502	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv886464	chr6:101922699-101962940	Enhancers Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv5413	chr6:101931887-101958981	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv437519	chr6:101932126-101951502	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv604278	chr6:101933087-101938966	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3489887	chr6:101933159-101940857	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv3473103	chr6:101933259-101939557	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
15	nsv511908	chr6:101933359-101939211	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
16	nsv604279	chr6:101933529-101937255	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
17	nsv604280	chr6:101933529-101938167	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
18	nsv604281	chr6:101933529-101938454	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
19	nsv604282	chr6:101933529-101938966	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
20	nsv511357	chr6:101933529-101939743	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
21	esv3489883	chr6:101933609-101940032	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
22	nsv7945	chr6:101933949-101940219	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
23	esv3489889	chr6:101934121-101939154	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
24	esv3489891	chr6:101934131-101940518	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
25	esv6416	chr6:101934306-101939234	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
26	esv3473104	chr6:101934422-101939123	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
27	esv3489888	chr6:101934441-101939163	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
28	esv3489890	chr6:101934458-101939111	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
29	esv3489884	chr6:101934472-101939064	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
30	esv3473101	chr6:101934478-101939106	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
31	esv3473102	chr6:101934491-101939058	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
32	esv3489885	chr6:101934498-101939077	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
33	esv3499007	chr6:101934501-101936538	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
34	esv3499009	chr6:101934501-101936538	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
35	esv3395783	chr6:101934521-101936508	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
36	nsv823794	chr6:101934548-101938921	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
37	esv13525	chr6:101934557-101939024	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
38	esv3473105	chr6:101934560-101939030	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
39	esv3489892	chr6:101934560-101939030	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
40	esv32923	chr6:101934635-101938750	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
41	nsv514381	chr6:101934683-101938779	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:101934000-101935000	Enhancers	iPS-18 Cell Line	embryonic stem cell

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