| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1007140 |
chr3:98421229-99202458 |
Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
17 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv536663 |
chr3:98421229-99202458 |
Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
17 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1007486 |
chr3:98597738-99249081 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv877215 |
chr3:98804408-98884699 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
nsv999649 |
chr3:98815244-98947271 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv536664 |
chr3:98815244-98947271 |
Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
