Variant report

Variant	rs542571943
Chromosome Location	chr4:143588283-143588284
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830101	chr4:143518810-143684392	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv966225	chr4:143588151-143592210	Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:143578600-143600600	Weak transcription	Fetal Heart	heart
2	chr4:143581600-143596600	Weak transcription	Stomach Smooth Muscle	stomach
3	chr4:143585400-143588400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
4	chr4:143585600-143588400	Weak transcription	Primary T helper cells PMA-I stimulated	--
5	chr4:143585600-143613000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr4:143588000-143588600	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 1	blood
7	chr4:143588200-143588600	ZNF genes & repeats	Primary hematopoietic stem cells	blood
8	chr4:143588200-143588600	ZNF genes & repeats	Aorta	Aorta
9	chr4:143588200-143591800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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