Variant report

Variant	rs542602884
Chromosome Location	chr6:75030342-75030343
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758061	chr6:74961996-75128165	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv2759442	chr6:74961996-75162222	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv2829863	chr6:74976178-75040446	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv886165	chr6:74981125-75070742	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv7921	chr6:75029817-75031869	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75028600-75030600	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr6:75028600-75030800	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr6:75028600-75031200	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr6:75029200-75030600	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr6:75029200-75030800	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr6:75029400-75030600	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr6:75030000-75030400	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
8	chr6:75030200-75030600	Enhancers	A549	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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