The 2.0 version of rSNPBase

Variant report

Variant rs542778366
Chromosome Location chr10:119042791-119042792
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:119020600-119043200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr10:119020600-119045400 Weak transcription Fetal Heart heart
3 chr10:119021400-119043200 Weak transcription Fetal Intestine Small intestine
4 chr10:119023800-119043200 Weak transcription Spleen Spleen
5 chr10:119029200-119042800 Weak transcription Primary T cells from cord blood blood
6 chr10:119029200-119043000 Weak transcription Fetal Thymus thymus
7 chr10:119029200-119043200 Weak transcription Fetal Stomach stomach
8 chr10:119031600-119043000 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr10:119031600-119043000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr10:119031600-119043000 Weak transcription A549 lung
11 chr10:119031800-119043200 Weak transcription NHEK skin
12 chr10:119031800-119043800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr10:119032000-119044000 Weak transcription Aorta Aorta
14 chr10:119032000-119050600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr10:119032400-119043800 Weak transcription Esophagus oesophagus
16 chr10:119032400-119051000 Weak transcription Ovary ovary
17 chr10:119032600-119043000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr10:119032600-119046200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr10:119032600-119063200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr10:119034400-119043200 Weak transcription Gastric stomach
21 chr10:119034800-119042800 Weak transcription Dnd41 blood
22 chr10:119035000-119042800 Weak transcription HSMM muscle
23 chr10:119035000-119043000 Weak transcription Muscle Satellite Cultured Cells --
24 chr10:119035200-119043800 Weak transcription Rectal Smooth Muscle rectum
25 chr10:119035400-119058000 Weak transcription Small Intestine intestine
26 chr10:119035800-119043800 Weak transcription Lung lung
27 chr10:119036400-119043000 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr10:119036600-119042800 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr10:119036600-119044200 Weak transcription HSMMtube muscle
30 chr10:119037200-119042800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr10:119037200-119044000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr10:119037600-119043200 Weak transcription Primary T cells fromperipheralblood blood
33 chr10:119037800-119043400 Weak transcription Primary B cells from peripheral blood blood
34 chr10:119038400-119043000 Weak transcription Stomach Mucosa stomach
35 chr10:119038600-119042800 Weak transcription Primary B cells from cord blood blood
36 chr10:119038600-119043200 Weak transcription Left Ventricle heart
37 chr10:119038600-119043200 Weak transcription Pancreas Pancrea
38 chr10:119038800-119043200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr10:119038800-119043400 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr10:119038800-119050000 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr10:119039200-119043000 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr10:119039200-119043200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr10:119039200-119043400 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr10:119039600-119042800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr10:119039800-119044200 Weak transcription Hela-S3 cervix
46 chr10:119040000-119042800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr10:119040000-119043000 Weak transcription Placenta Placenta
48 chr10:119040000-119043200 Weak transcription Osteobl bone
49 chr10:119040200-119042800 Weak transcription Brain Anterior Caudate brain
50 chr10:119040200-119043400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015