The 2.0 version of rSNPBase

Variant report

Variant rs543538
Chromosome Location chr9:15251009-15251010
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:15223400-15258200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr9:15238400-15275400 Weak transcription Fetal Intestine Large intestine
3 chr9:15240400-15265600 Weak transcription Rectal Smooth Muscle rectum
4 chr9:15240600-15275400 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr9:15241200-15273400 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr9:15241200-15286200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr9:15243000-15293400 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr9:15243400-15253600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr9:15244600-15273400 Weak transcription Stomach Mucosa stomach
10 chr9:15244800-15253400 Weak transcription Primary T cells from cord blood blood
11 chr9:15247000-15271400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr9:15247600-15253200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr9:15247800-15253200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr9:15248600-15253600 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr9:15249200-15251600 Enhancers Primary T helper cells fromperipheralblood blood
16 chr9:15249200-15265200 Weak transcription Lung lung
17 chr9:15249400-15268600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr9:15249600-15256400 Weak transcription Fetal Lung lung
19 chr9:15249600-15276200 Weak transcription Fetal Kidney kidney
20 chr9:15249800-15255600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr9:15249800-15260000 Weak transcription Left Ventricle heart
22 chr9:15249800-15268400 Weak transcription Psoas Muscle Psoas
23 chr9:15249800-15276200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr9:15250000-15265800 Weak transcription Stomach Smooth Muscle stomach
25 chr9:15250200-15253000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr9:15250200-15253000 Weak transcription HepG2 liver
27 chr9:15250200-15253000 Weak transcription HUVEC blood vessel
28 chr9:15250200-15253200 Weak transcription NH-A brain
29 chr9:15250200-15253400 Weak transcription Osteobl bone
30 chr9:15250200-15255200 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr9:15250200-15258000 Weak transcription Aorta Aorta
32 chr9:15250200-15258400 Weak transcription Fetal Intestine Small intestine
33 chr9:15250200-15258400 Weak transcription Ovary ovary
34 chr9:15250200-15268200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr9:15250200-15272200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr9:15250200-15288200 Weak transcription Fetal Stomach stomach
37 chr9:15250400-15253200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr9:15250400-15253200 Weak transcription HSMM muscle
39 chr9:15250400-15256600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr9:15250400-15260200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr9:15250600-15251400 Enhancers Primary T helper cells PMA-I stimulated --
42 chr9:15250600-15252000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr9:15250600-15253000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr9:15250600-15253200 Weak transcription Muscle Satellite Cultured Cells --
45 chr9:15250800-15251200 Enhancers Primary T cells fromperipheralblood blood
46 chr9:15250800-15258400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr9:15251000-15272000 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015