Variant report

Variant	rs543854997
Chromosome Location	chr7:137809669-137809670
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831151	chr7:137711447-137865471	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	14 gene(s)	inside rSNPs	diseases
2	esv34048	chr7:137724092-138213119	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
3	nsv608471	chr7:137808839-137847598	Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Weak transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137802200-137809800	Weak transcription	Fetal Intestine Small	intestine
2	chr7:137805000-137810000	Weak transcription	Liver	Liver
3	chr7:137807000-137810200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr7:137809000-137809800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr7:137809200-137810800	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr7:137809200-137810800	Enhancers	NH-A	brain
7	chr7:137809200-137811000	Enhancers	HMEC	breast
8	chr7:137809200-137811200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr7:137809200-137811200	Enhancers	Hela-S3	cervix
10	chr7:137809400-137809800	Enhancers	iPS-20b Cell Line	embryonic stem cell
11	chr7:137809400-137809800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr7:137809400-137811000	Enhancers	HepG2	liver
13	chr7:137809400-137812600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr7:137809600-137810200	Enhancers	ES-I3 Cell Line	embryonic stem cell
15	chr7:137809600-137810400	Enhancers	Monocytes-CD14+_RO01746	blood
16	chr7:137809600-137810600	Enhancers	HUES6 Cell Line	embryonic stem cell
17	chr7:137809600-137811000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr7:137809600-137811000	Enhancers	Primary monocytes fromperipheralblood	blood
19	chr7:137809600-137811000	Enhancers	GM12878-XiMat	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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