Variant report

Variant rs544301713
Chromosome Location chr1:220870495-220870496
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220865200-220873200 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr1:220865200-220874200 Weak transcription Rectal Smooth Muscle rectum
3 chr1:220865200-220879200 Weak transcription Ovary ovary
4 chr1:220865400-220870800 Weak transcription Brain Angular Gyrus brain
5 chr1:220865400-220873200 Weak transcription Fetal Brain Female brain
6 chr1:220865400-220873800 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr1:220865400-220874400 Weak transcription Colonic Mucosa Colon
8 chr1:220865400-220876200 Weak transcription H1 Cell Line embryonic stem cell
9 chr1:220865600-220870800 Weak transcription Brain Anterior Caudate brain
10 chr1:220866000-220872400 Weak transcription Colon Smooth Muscle Colon
11 chr1:220866000-220873400 Weak transcription Brain Cingulate Gyrus brain
12 chr1:220866000-220873600 Weak transcription Brain Hippocampus Middle brain
13 chr1:220866600-220872400 Weak transcription Fetal Brain Male brain
14 chr1:220866600-220879600 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr1:220867200-220870600 Weak transcription Fetal Lung lung
16 chr1:220868400-220873200 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr1:220868400-220873600 Strong transcription Fetal Intestine Small intestine
18 chr1:220869800-220870600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:220869800-220870800 Strong transcription Fetal Intestine Large intestine
20 chr1:220869800-220871600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr1:220869800-220872000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr1:220869800-220872000 Genic enhancers Placenta Placenta
23 chr1:220869800-220872600 Strong transcription Duodenum Mucosa Duodenum
24 chr1:220870000-220870600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr1:220870000-220870600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:220870000-220871000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:220870000-220871400 Strong transcription Aorta Aorta
28 chr1:220870000-220871600 Strong transcription Left Ventricle heart
29 chr1:220870000-220871600 Strong transcription Pancreas Pancrea
30 chr1:220870000-220871800 Strong transcription Adipose Nuclei Adipose
31 chr1:220870000-220872000 Strong transcription Rectal Mucosa Donor 31 rectum
32 chr1:220870000-220872600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:220870000-220872800 Genic enhancers Liver Liver
34 chr1:220870000-220873600 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr1:220870200-220870600 Enhancers Cortex derived primary cultured neurospheres brain
36 chr1:220870200-220871000 Strong transcription HepG2 liver
37 chr1:220870200-220871400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr1:220870200-220871400 Strong transcription Skeletal Muscle Male skeletal muscle
39 chr1:220870200-220871600 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr1:220870200-220871600 Strong transcription Gastric stomach
41 chr1:220870200-220871600 Strong transcription Rectal Mucosa Donor 29 rectum
42 chr1:220870200-220871800 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr1:220870200-220871800 Strong transcription Spleen Spleen
44 chr1:220870200-220872000 Strong transcription Sigmoid Colon Sigmoid Colon
45 chr1:220870400-220872000 Strong transcription Lung lung
46 chr1:220870400-220872000 Strong transcription Right Ventricle heart
47 chr1:220870400-220873600 Weak transcription Placenta Amnion Placenta Amnion

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