Variant report

Variant	rs545624320
Chromosome Location	chr8:110234872-110234873
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:24 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023204	chr8:110169573-110303085	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1031663	chr8:110177432-110303085	Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv891272	chr8:110217266-110268104	Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Enhancers Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv891273	chr8:110219735-110475874	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
5	nsv891274	chr8:110224047-110308776	Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
6	nsv891275	chr8:110224047-110319234	Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
7	nsv891276	chr8:110232329-110308776	Weak transcription Active TSS Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
8	esv3479819	chr8:110232776-110236974	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
9	esv1954796	chr8:110234561-110235235	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
10	esv4972	chr8:110234569-110235229	Strong transcription Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
11	esv3479815	chr8:110234592-110235156	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv3496961	chr8:110234602-110235135	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv3479816	chr8:110234631-110235124	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
14	esv3496959	chr8:110234633-110235092	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
15	esv3496958	chr8:110234643-110235101	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
16	esv3479814	chr8:110234643-110235124	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
17	esv3439022	chr8:110234647-110235108	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
18	esv3479817	chr8:110234653-110235077	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
19	esv3496962	chr8:110234661-110235102	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
20	esv3332198	chr8:110234681-110235072	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
21	esv3479813	chr8:110234706-110235057	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
22	esv3496960	chr8:110234718-110235052	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
23	esv3479820	chr8:110234720-110235053	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
24	esv3496963	chr8:110234720-110235053	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110191400-110237400	Weak transcription	Left Ventricle	heart
2	chr8:110211200-110311600	Weak transcription	Right Ventricle	heart
3	chr8:110225800-110241800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr8:110230400-110241000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr8:110231000-110238600	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr8:110231400-110236800	Weak transcription	Ovary	ovary
7	chr8:110231600-110235600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr8:110231800-110235400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr8:110231800-110235400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr8:110231800-110237400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr8:110231800-110242200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr8:110233600-110239000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
13	chr8:110233800-110235800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
14	chr8:110233800-110236200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr8:110233800-110237400	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr8:110234200-110237400	Weak transcription	Pancreas	Pancrea
17	chr8:110234200-110241200	Weak transcription	HUVEC	blood vessel
18	chr8:110234400-110235400	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
19	chr8:110234400-110235800	Weak transcription	Brain Germinal Matrix	brain
20	chr8:110234400-110236000	Weak transcription	A549	lung
21	chr8:110234400-110237400	Weak transcription	Duodenum Smooth Muscle	Duodenum
22	chr8:110234600-110237400	Weak transcription	Skeletal Muscle Male	skeletal muscle
23	chr8:110234600-110240400	Weak transcription	HMEC	breast
24	chr8:110234800-110235000	ZNF genes & repeats	Liver	Liver
25	chr8:110234800-110238000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr8:110234800-110264200	Weak transcription	Primary B cells from peripheral blood	blood

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