Variant report

Variant	rs545878525
Chromosome Location	chr1:76720178-76720179
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv870621	chr1:76620313-76997071	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1008763	chr1:76692057-76723417	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1001452	chr1:76692057-76724652	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv546584	chr1:76693367-76721164	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv523526	chr1:76695356-76721164	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv1499	chr1:76704981-76749688	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv534168	chr1:76718950-77039352	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:76713400-76720200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr1:76716400-76722000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr1:76716400-76723200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr1:76716600-76723600	Weak transcription	Fetal Muscle Leg	muscle
5	chr1:76717600-76722000	Weak transcription	Fetal Lung	lung
6	chr1:76718600-76722000	Weak transcription	Small Intestine	intestine
7	chr1:76719000-76720600	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr1:76719200-76721000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr1:76719400-76722000	Enhancers	Primary T cells from cord blood	blood
10	chr1:76719600-76720200	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr1:76719600-76720400	Enhancers	iPS-20b Cell Line	embryonic stem cell
12	chr1:76719600-76720400	Flanking Active TSS	HUVEC	blood vessel
13	chr1:76719600-76720600	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr1:76719600-76720600	Enhancers	Cortex derived primary cultured neurospheres	brain
15	chr1:76719600-76720600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
16	chr1:76719600-76720800	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr1:76719600-76720800	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr1:76719600-76722000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
19	chr1:76719600-76727200	Weak transcription	Aorta	Aorta
20	chr1:76719600-76727600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
21	chr1:76719800-76720200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr1:76719800-76720200	Enhancers	Brain Hippocampus Middle	brain
23	chr1:76719800-76720400	Weak transcription	Primary hematopoietic stem cells	blood
24	chr1:76719800-76720400	Enhancers	Pancreatic Islets	Pancreatic Islet
25	chr1:76719800-76720400	Enhancers	NH-A	brain
26	chr1:76719800-76720600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
27	chr1:76719800-76721600	Enhancers	Primary neutrophils fromperipheralblood	blood
28	chr1:76719800-76722800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr1:76719800-76724000	Weak transcription	Adipose Nuclei	Adipose
30	chr1:76720000-76720400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr1:76720000-76720400	Flanking Active TSS	NHDF-Ad	bronchial
32	chr1:76720000-76721400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr1:76720000-76723000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
34	chr1:76720000-76724400	Enhancers	Fetal Thymus	thymus
35	chr1:76720000-76726200	Weak transcription	Brain Cingulate Gyrus	brain
36	chr1:76720000-76727600	Enhancers	Primary T helper naive cells from peripheral blood	blood

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