Variant report

Variant rs546734399
Chromosome Location chr9:6688783-6688784
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:6682600-6689600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr9:6682600-6689800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr9:6682600-6691000 Weak transcription Esophagus oesophagus
4 chr9:6682600-6692000 Weak transcription Fetal Stomach stomach
5 chr9:6682600-6703200 Weak transcription Thymus Thymus
6 chr9:6682600-6703600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr9:6682800-6689600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr9:6682800-6690600 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr9:6682800-6692400 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr9:6682800-6693200 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr9:6682800-6693200 Weak transcription Fetal Brain Male brain
12 chr9:6683000-6691400 Weak transcription Brain Cingulate Gyrus brain
13 chr9:6683000-6691800 Weak transcription H1 Cell Line embryonic stem cell
14 chr9:6683400-6690600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr9:6683400-6692600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr9:6683600-6689200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr9:6683600-6689800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr9:6683600-6690600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr9:6683600-6690600 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr9:6683600-6691000 Weak transcription NHDF-Ad bronchial
21 chr9:6683600-6692400 Weak transcription HUVEC blood vessel
22 chr9:6683600-6692600 Weak transcription H9 Cell Line embryonic stem cell
23 chr9:6683600-6693000 Enhancers Primary B cells from peripheral blood blood
24 chr9:6683600-6693200 Weak transcription Duodenum Mucosa Duodenum
25 chr9:6683600-6703200 Weak transcription Fetal Muscle Leg muscle
26 chr9:6683800-6689600 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr9:6683800-6690800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr9:6683800-6692600 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr9:6683800-6692600 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr9:6683800-6692800 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr9:6684000-6690800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr9:6684400-6689800 Weak transcription Primary hematopoietic stem cells blood
33 chr9:6684400-6689800 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr9:6684600-6690000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr9:6684800-6689800 Weak transcription Primary monocytes fromperipheralblood blood
36 chr9:6685000-6690000 Weak transcription Dnd41 blood
37 chr9:6685000-6692000 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr9:6686000-6692800 Enhancers Primary B cells from cord blood blood
39 chr9:6686600-6688800 Weak transcription NHEK skin
40 chr9:6686600-6690200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr9:6686600-6691800 Weak transcription A549 lung
42 chr9:6686800-6690000 Weak transcription Liver Liver
43 chr9:6686800-6690000 Weak transcription Osteobl bone
44 chr9:6686800-6690200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr9:6686800-6691400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr9:6688000-6689200 Strong transcription HSMM muscle
47 chr9:6688000-6691400 Weak transcription Fetal Intestine Small intestine
48 chr9:6688600-6690000 Enhancers GM12878-XiMat blood

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