The 2.0 version of rSNPBase

Variant report

Variant rs548324
Chromosome Location chr2:21000157-21000158
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20954200-21001200 Weak transcription NH-A brain
2 chr2:20965800-21003400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr2:20968400-21003000 Weak transcription Pancreas Pancrea
4 chr2:20969000-21003000 Weak transcription Gastric stomach
5 chr2:20973200-21003000 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr2:20974600-21021800 Weak transcription Thymus Thymus
7 chr2:20974800-21000200 Weak transcription HSMM muscle
8 chr2:20989200-21006000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr2:20989600-21003200 Weak transcription Left Ventricle heart
10 chr2:20989600-21009000 Weak transcription Fetal Lung lung
11 chr2:20989600-21010400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr2:20989800-21000400 Weak transcription Fetal Stomach stomach
13 chr2:20989800-21003200 Weak transcription Aorta Aorta
14 chr2:20989800-21003800 Weak transcription Duodenum Mucosa Duodenum
15 chr2:20990000-21002400 Weak transcription Fetal Thymus thymus
16 chr2:20990200-21002800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr2:20990200-21003000 Weak transcription Lung lung
18 chr2:20990200-21006200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr2:20990400-21001600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr2:20994000-21002600 Weak transcription Fetal Intestine Large intestine
21 chr2:20994200-21003000 Weak transcription Fetal Muscle Trunk muscle
22 chr2:20994600-21000800 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr2:20994800-21021600 Weak transcription Primary B cells from peripheral blood blood
24 chr2:20994800-21021600 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr2:20994800-21021800 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr2:20995000-21002600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr2:20995000-21002800 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr2:20995000-21017600 Weak transcription A549 lung
29 chr2:20995200-21003000 Weak transcription Ovary ovary
30 chr2:20995200-21021600 Weak transcription K562 blood
31 chr2:20996400-21003200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:20996600-21002600 Weak transcription Fetal Intestine Small intestine
33 chr2:20996600-21013200 Weak transcription HSMMtube muscle
34 chr2:20996800-21003000 Weak transcription HMEC breast
35 chr2:20996800-21006000 Weak transcription Muscle Satellite Cultured Cells --
36 chr2:20997200-21002800 Weak transcription Adipose Nuclei Adipose
37 chr2:20997400-21000200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr2:20997400-21000200 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr2:20997400-21001600 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr2:20997400-21003000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr2:20997400-21005800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr2:20997400-21018600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr2:20997400-21021600 Weak transcription Primary B cells from cord blood blood
44 chr2:20997600-21002600 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr2:20997800-21001200 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr2:20998000-21000200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr2:20998200-21002800 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr2:20998200-21002800 Weak transcription GM12878-XiMat blood
49 chr2:20998200-21003000 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr2:20998200-21005800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015