| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv997750 |
chr4:87933945-88264127 |
Strong transcription Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
25 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1007020 |
chr4:88046263-88235018 |
Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv537169 |
chr4:88046263-88235018 |
Weak transcription Active TSS Strong transcription Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv516203 |
chr4:88167878-88228228 |
Enhancers Strong transcription Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv870296 |
chr4:88173534-88295927 |
Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv537171 |
chr4:88182433-88209309 |
Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv470050 |
chr4:88186509-88228228 |
Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv1014215 |
chr4:88192854-88225673 |
Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer Strong transcription
|
TF binding regionChromatin interactive regionlncRNAmiRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv537172 |
chr4:88192854-88225673 |
Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Weak transcription Bivalent Enhancer
|
TF binding regionChromatin interactive regionlncRNAmiRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv1005615 |
chr4:88194170-88224906 |
Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer
|
TF binding regionChromatin interactive regionlncRNAmiRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
esv2760913 |
chr4:88194170-88228412 |
Flanking Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
nsv879527 |
chr4:88194170-88250203 |
Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
