The 2.0 version of rSNPBase

Variant report

Variant rs549282037
Chromosome Location chr4:166259739-166259740
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:166249600-166266600 Weak transcription Left Ventricle heart
2 chr4:166249800-166262400 Weak transcription Placenta Amnion Placenta Amnion
3 chr4:166249800-166262600 Weak transcription Thymus Thymus
4 chr4:166250000-166264600 Weak transcription Rectal Smooth Muscle rectum
5 chr4:166250200-166259800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr4:166250200-166260400 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr4:166250200-166260800 Weak transcription Stomach Smooth Muscle stomach
8 chr4:166250200-166262600 Weak transcription Spleen Spleen
9 chr4:166250200-166262800 Weak transcription Right Ventricle heart
10 chr4:166250200-166263800 Weak transcription Colon Smooth Muscle Colon
11 chr4:166250200-166265000 Weak transcription Psoas Muscle Psoas
12 chr4:166250200-166265200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr4:166250400-166260800 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr4:166250400-166260800 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr4:166250400-166262600 Weak transcription Aorta Aorta
16 chr4:166250600-166259800 Weak transcription Adipose Nuclei Adipose
17 chr4:166250600-166259800 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr4:166250600-166263200 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr4:166250600-166265400 Weak transcription Colonic Mucosa Colon
20 chr4:166250600-166266800 Weak transcription A549 lung
21 chr4:166252200-166260200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr4:166252200-166269200 Weak transcription Stomach Mucosa stomach
23 chr4:166252200-166269400 Weak transcription Gastric stomach
24 chr4:166252400-166260400 Weak transcription Esophagus oesophagus
25 chr4:166252400-166260400 Weak transcription Ovary ovary
26 chr4:166252600-166260200 Weak transcription Fetal Intestine Small intestine
27 chr4:166253200-166260200 Weak transcription Fetal Stomach stomach
28 chr4:166253400-166260200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr4:166253400-166263000 Weak transcription Pancreas Pancrea
30 chr4:166253400-166272600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr4:166253600-166265400 Strong transcription HUES48 Cell Line embryonic stem cell
32 chr4:166253800-166260200 Weak transcription Lung lung
33 chr4:166253800-166265200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr4:166253800-166266600 Weak transcription Small Intestine intestine
35 chr4:166254000-166260200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr4:166254000-166260400 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr4:166254000-166260400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr4:166254000-166264600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr4:166254000-166264800 Weak transcription Hela-S3 cervix
40 chr4:166254000-166265200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr4:166254000-166265200 Strong transcription NHDF-Ad bronchial
42 chr4:166254000-166269400 Weak transcription Fetal Heart heart
43 chr4:166254200-166261200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr4:166254200-166264200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr4:166254200-166265200 Strong transcription Fetal Thymus thymus
46 chr4:166254400-166263200 Strong transcription H1 Cell Line embryonic stem cell
47 chr4:166254600-166265200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr4:166254600-166265400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr4:166254800-166259800 Genic enhancers Liver Liver
50 chr4:166254800-166264200 Strong transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015