Variant report

Variant	rs549409576
Chromosome Location	chr2:37643212-37643213
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:37636169..37638142-chr2:37642427..37644282,2	K562	blood:

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833814	chr2:37643132-37840247	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37641800-37643400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr2:37641800-37643600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr2:37641800-37643800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr2:37641800-37645600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr2:37642000-37643400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr2:37642200-37644400	Weak transcription	NH-A	brain
7	chr2:37642200-37649000	Weak transcription	Fetal Lung	lung
8	chr2:37642400-37644200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr2:37642400-37644400	Weak transcription	HSMMtube	muscle
10	chr2:37642400-37644600	Weak transcription	Fetal Muscle Leg	muscle
11	chr2:37642400-37645600	Enhancers	Fetal Heart	heart
12	chr2:37642400-37648800	Weak transcription	Fetal Kidney	kidney
13	chr2:37642600-37643800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr2:37642600-37644200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr2:37642600-37644200	Weak transcription	HSMM	muscle
16	chr2:37642600-37644400	Weak transcription	Rectal Smooth Muscle	rectum
17	chr2:37642600-37648800	Weak transcription	Fetal Stomach	stomach
18	chr2:37642800-37643600	Enhancers	K562	blood
19	chr2:37642800-37644200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr2:37642800-37644200	Weak transcription	Osteobl	bone
21	chr2:37643000-37648800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr2:37643200-37644200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr2:37643200-37644200	Weak transcription	Muscle Satellite Cultured Cells	--
24	chr2:37643200-37644200	Weak transcription	NHDF-Ad	bronchial
25	chr2:37643200-37644400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr2:37643200-37646200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr2:37643200-37651200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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