Variant report
| Variant | rs549534504 |
|---|---|
| Chromosome Location | chr2:11736521-11736522 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:11678400-11757000 | Weak transcription | Right Ventricle | heart |
| 2 | chr2:11694800-11755200 | Weak transcription | Gastric | stomach |
| 3 | chr2:11700000-11767000 | Weak transcription | Right Atrium | heart |
| 4 | chr2:11711600-11738600 | Weak transcription | Left Ventricle | heart |
| 5 | chr2:11714400-11765000 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 6 | chr2:11717600-11767000 | Weak transcription | Fetal Intestine Small | intestine |
| 7 | chr2:11719200-11738000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 8 | chr2:11719400-11750800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 9 | chr2:11723000-11740400 | Weak transcription | Liver | Liver |
| 10 | chr2:11723400-11740000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 11 | chr2:11723600-11738600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 12 | chr2:11724400-11738000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 13 | chr2:11724400-11738600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 14 | chr2:11724400-11788600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 15 | chr2:11724600-11741000 | Weak transcription | Brain Anterior Caudate | brain |
| 16 | chr2:11724600-11766800 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 17 | chr2:11724600-11766800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 18 | chr2:11724800-11749600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 19 | chr2:11725000-11743800 | Weak transcription | Fetal Kidney | kidney |
| 20 | chr2:11725400-11742400 | Strong transcription | Ovary | ovary |
| 21 | chr2:11725600-11766800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 22 | chr2:11732800-11736800 | Strong transcription | Fetal Stomach | stomach |
| 23 | chr2:11733400-11750800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 24 | chr2:11733600-11737000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 25 | chr2:11733600-11737000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 26 | chr2:11733600-11750600 | Weak transcription | Pancreas | Pancrea |
| 27 | chr2:11733600-11784000 | Strong transcription | HepG2 | liver |
| 28 | chr2:11735000-11737800 | Strong transcription | Fetal Muscle Trunk | muscle |
| 29 | chr2:11735200-11736600 | Strong transcription | iPS-15b Cell Line | embryonic stem cell |
| 30 | chr2:11735200-11738400 | Genic enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 31 | chr2:11735200-11744600 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 32 | chr2:11735200-11746400 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 33 | chr2:11735400-11736600 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 34 | chr2:11735600-11745000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 35 | chr2:11735600-11746600 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 36 | chr2:11736000-11737400 | Weak transcription | Brain Hippocampus Middle | brain |
| 37 | chr2:11736000-11737800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 38 | chr2:11736000-11743000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 39 | chr2:11736200-11737400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 40 | chr2:11736200-11737600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 41 | chr2:11736200-11738400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 42 | chr2:11736200-11738600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 43 | chr2:11736200-11741000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 44 | chr2:11736200-11765000 | Weak transcription | Fetal Lung | lung |
| 45 | chr2:11736400-11737800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 46 | chr2:11736400-11738000 | Weak transcription | Fetal Muscle Leg | muscle |
| 47 | chr2:11736400-11738200 | Weak transcription | Brain Angular Gyrus | brain |
| 48 | chr2:11736400-11740000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 49 | chr2:11736400-11755400 | Weak transcription | Brain Substantia Nigra | brain |
