The 2.0 version of rSNPBase

Variant report

Variant rs549672393
Chromosome Location chr4:86924417-86924418
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:86889400-86935000 Weak transcription Psoas Muscle Psoas
2 chr4:86899200-86927000 Weak transcription Lung lung
3 chr4:86916800-86929400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr4:86916800-86935800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr4:86916800-86985400 Weak transcription Ovary ovary
6 chr4:86917000-86925000 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr4:86917000-86926000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr4:86917000-86929000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr4:86917000-86931800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr4:86917000-86931800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr4:86917000-86931800 Weak transcription Osteobl bone
12 chr4:86917000-86932000 Weak transcription NHLF lung
13 chr4:86917000-86932400 Weak transcription Fetal Lung lung
14 chr4:86917000-86932400 Weak transcription Right Ventricle heart
15 chr4:86917000-86933800 Weak transcription Gastric stomach
16 chr4:86917000-86933800 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr4:86917000-86935200 Weak transcription Left Ventricle heart
18 chr4:86917000-86935800 Weak transcription Spleen Spleen
19 chr4:86917000-86954000 Weak transcription Pancreas Pancrea
20 chr4:86917200-86932000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr4:86917400-86924600 Weak transcription Stomach Smooth Muscle stomach
22 chr4:86917400-86926800 Weak transcription Fetal Stomach stomach
23 chr4:86917400-86940400 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr4:86917600-86926000 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr4:86917800-86931600 Weak transcription NHDF-Ad bronchial
26 chr4:86918000-86924600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr4:86918000-86931800 Weak transcription Muscle Satellite Cultured Cells --
28 chr4:86918200-86924800 Weak transcription Fetal Kidney kidney
29 chr4:86919400-86941200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr4:86919800-86925600 Strong transcription Primary B cells from peripheral blood blood
31 chr4:86920200-86933800 Weak transcription Aorta Aorta
32 chr4:86920800-86928600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr4:86921200-86928400 Strong transcription HUVEC blood vessel
34 chr4:86921600-86925800 Strong transcription Primary neutrophils fromperipheralblood blood
35 chr4:86921800-86932200 Weak transcription Fetal Heart heart
36 chr4:86922000-86927200 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr4:86922800-86924600 Weak transcription HSMMtube muscle
38 chr4:86922800-86924800 Weak transcription HSMM muscle
39 chr4:86922800-86935200 Weak transcription Right Atrium heart
40 chr4:86923000-86924600 Weak transcription Primary monocytes fromperipheralblood blood
41 chr4:86923200-86924600 Weak transcription Primary B cells from cord blood blood
42 chr4:86923400-86931800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr4:86923600-86924600 Weak transcription Adipose Nuclei Adipose
44 chr4:86924200-86928600 Strong transcription Fetal Muscle Leg muscle
45 chr4:86924400-86925600 Strong transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015