Variant report

Variant rs550230193
Chromosome Location chr7:6692539-6692540
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:6678200-6698200 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr7:6679000-6692600 Strong transcription Primary B cells from peripheral blood blood
3 chr7:6679000-6695200 Strong transcription Stomach Smooth Muscle stomach
4 chr7:6679000-6695400 Strong transcription Brain Inferior Temporal Lobe brain
5 chr7:6679200-6695400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr7:6679400-6696400 Strong transcription Brain Hippocampus Middle brain
7 chr7:6679400-6703600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr7:6679600-6693200 Strong transcription Rectal Smooth Muscle rectum
9 chr7:6679600-6699200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr7:6679800-6695600 Strong transcription Primary T helper cells fromperipheralblood blood
11 chr7:6680000-6692600 Strong transcription Primary T helper cells PMA-I stimulated --
12 chr7:6680000-6692600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
13 chr7:6680000-6695200 Strong transcription Duodenum Mucosa Duodenum
14 chr7:6680400-6694600 Strong transcription Brain Cingulate Gyrus brain
15 chr7:6680400-6695200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr7:6680400-6695600 Strong transcription Rectal Mucosa Donor 29 rectum
17 chr7:6680400-6698600 Weak transcription Right Atrium heart
18 chr7:6680600-6692600 Strong transcription Primary T cells fromperipheralblood blood
19 chr7:6680600-6695200 Strong transcription Duodenum Smooth Muscle Duodenum
20 chr7:6680600-6695400 Strong transcription Brain Anterior Caudate brain
21 chr7:6681000-6693400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr7:6682400-6698800 Weak transcription Fetal Kidney kidney
23 chr7:6683200-6693400 Weak transcription Stomach Mucosa stomach
24 chr7:6683800-6696600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr7:6684600-6694000 Weak transcription NHDF-Ad bronchial
26 chr7:6684600-6698200 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr7:6684800-6699000 Weak transcription H9 Cell Line embryonic stem cell
28 chr7:6685600-6695600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
29 chr7:6686800-6695600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
30 chr7:6687400-6692600 Strong transcription Fetal Muscle Trunk muscle
31 chr7:6687400-6693000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
32 chr7:6687800-6692600 Strong transcription Brain Substantia Nigra brain
33 chr7:6687800-6692600 ZNF genes & repeats Fetal Stomach stomach
34 chr7:6687800-6695200 ZNF genes & repeats Fetal Intestine Large intestine
35 chr7:6687800-6695400 Strong transcription Right Ventricle heart
36 chr7:6687800-6695800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr7:6687800-6696600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
38 chr7:6688000-6693200 ZNF genes & repeats Primary hematopoietic stem cells blood
39 chr7:6688000-6693200 Strong transcription Fetal Lung lung
40 chr7:6688000-6695800 Strong transcription Skeletal Muscle Male skeletal muscle
41 chr7:6688600-6695600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
42 chr7:6688800-6693000 ZNF genes & repeats Primary B cells from cord blood blood
43 chr7:6689000-6694600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr7:6689000-6695400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr7:6689000-6696000 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
46 chr7:6689200-6694800 ZNF genes & repeats Brain Germinal Matrix brain
47 chr7:6689200-6695200 ZNF genes & repeats Thymus Thymus
48 chr7:6689400-6693000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
49 chr7:6689400-6693200 ZNF genes & repeats Fetal Thymus thymus
50 chr7:6689400-6694000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links