The 2.0 version of rSNPBase

Variant report

Variant rs550412112
Chromosome Location chr2:128078283-128078284
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128058600-128085600 Strong transcription Primary B cells from cord blood blood
2 chr2:128059400-128082800 Strong transcription Liver Liver
3 chr2:128059400-128109600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr2:128059800-128093000 Weak transcription H9 Cell Line embryonic stem cell
5 chr2:128061600-128098200 Strong transcription Primary T regulatory cells fromperipheralblood blood
6 chr2:128061800-128096800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr2:128062000-128083200 Strong transcription Primary T cells from cord blood blood
8 chr2:128062000-128085000 Strong transcription Duodenum Mucosa Duodenum
9 chr2:128062000-128086600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr2:128062400-128094000 Strong transcription Rectal Mucosa Donor 29 rectum
11 chr2:128062600-128083400 Strong transcription Fetal Muscle Trunk muscle
12 chr2:128062600-128083400 Strong transcription Thymus Thymus
13 chr2:128062600-128089400 Strong transcription Primary T helper cells fromperipheralblood blood
14 chr2:128062800-128098000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
15 chr2:128063000-128078400 Strong transcription Adipose Nuclei Adipose
16 chr2:128063000-128080200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr2:128063000-128089200 Strong transcription Skeletal Muscle Female skeletal muscle
18 chr2:128063200-128080200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr2:128063400-128084800 Strong transcription Primary T helper cells PMA-I stimulated --
20 chr2:128063400-128098400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr2:128063600-128081200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr2:128063600-128083400 Strong transcription Primary T helper naive cells fromperipheralblood blood
23 chr2:128063600-128091800 Strong transcription Placenta Placenta
24 chr2:128063800-128081400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
25 chr2:128063800-128083400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
26 chr2:128064200-128083800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr2:128064200-128090000 Weak transcription Psoas Muscle Psoas
28 chr2:128065000-128100200 Weak transcription Stomach Mucosa stomach
29 chr2:128066400-128090600 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr2:128067400-128080000 Strong transcription Duodenum Smooth Muscle Duodenum
31 chr2:128068200-128092200 Weak transcription Pancreas Pancrea
32 chr2:128069000-128117000 Weak transcription Small Intestine intestine
33 chr2:128069600-128079000 Strong transcription HepG2 liver
34 chr2:128070200-128081400 Strong transcription Left Ventricle heart
35 chr2:128071200-128079400 Strong transcription Sigmoid Colon Sigmoid Colon
36 chr2:128071200-128080000 Strong transcription Rectal Mucosa Donor 31 rectum
37 chr2:128071600-128089000 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr2:128072200-128090000 Weak transcription Colonic Mucosa Colon
39 chr2:128072200-128098200 Strong transcription Primary monocytes fromperipheralblood blood
40 chr2:128072200-128101400 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr2:128072200-128109600 Weak transcription Esophagus oesophagus
42 chr2:128072200-128111800 Weak transcription K562 blood
43 chr2:128072600-128112000 Weak transcription NHEK skin
44 chr2:128073000-128079000 Strong transcription Primary T killer naive cells fromperipheralblood blood
45 chr2:128073200-128078400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr2:128073200-128088800 Weak transcription H1 Cell Line embryonic stem cell
47 chr2:128073600-128080000 Strong transcription Skeletal Muscle Male skeletal muscle
48 chr2:128074000-128079600 Strong transcription Primary T killer memory cells from peripheral blood blood
49 chr2:128074400-128078400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr2:128074800-128106800 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015