Variant report

Variant	rs550587363
Chromosome Location	chr7:147472709-147472710
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933973	chr7:147438206-147549993	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
2	esv3444543	chr7:147471469-147473567	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
3	nsv889397	chr7:147471710-147585819	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147461200-147472800	Weak transcription	Brain Angular Gyrus	brain
2	chr7:147468800-147473000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr7:147471400-147472800	Weak transcription	Brain Substantia Nigra	brain
4	chr7:147472000-147472800	Weak transcription	Brain Hippocampus Middle	brain
5	chr7:147472600-147473200	Enhancers	Brain Cingulate Gyrus	brain
6	chr7:147472600-147473400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr7:147472600-147473600	Enhancers	Brain Inferior Temporal Lobe	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links