Variant report

Variant	rs551161421
Chromosome Location	chr13:70154657-70154658
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045844	chr13:70038096-70405435	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv1833005	chr13:70090874-70180509	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1049684	chr13:70126871-70333445	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv900481	chr13:70147851-70560731	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:70153600-70155000	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr13:70153600-70155200	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr13:70153800-70154800	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr13:70153800-70154800	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr13:70153800-70155000	Enhancers	HMEC	breast
6	chr13:70153800-70155200	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr13:70154000-70154800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr13:70154200-70154800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
9	chr13:70154200-70154800	Enhancers	H1 Cell Line	embryonic stem cell
10	chr13:70154200-70154800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr13:70154200-70156000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr13:70154600-70155000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links