Variant report

Variant rs551588580
Chromosome Location chr2:210552194-210552195
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:210531400-210587800 Weak transcription Brain Angular Gyrus brain
2 chr2:210536600-210552200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:210537000-210596800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr2:210540200-210552200 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr2:210541800-210596400 Weak transcription Gastric stomach
6 chr2:210542000-210555400 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr2:210543600-210552200 Weak transcription Pancreas Pancrea
8 chr2:210544000-210596600 Weak transcription Ovary ovary
9 chr2:210544200-210555200 Weak transcription Left Ventricle heart
10 chr2:210544400-210598600 Weak transcription Brain Cingulate Gyrus brain
11 chr2:210546200-210552400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr2:210546400-210554800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr2:210546800-210560000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr2:210547600-210552200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr2:210547800-210552200 Weak transcription Aorta Aorta
16 chr2:210549200-210559600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr2:210550400-210552800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr2:210550800-210552200 Weak transcription Fetal Brain Male brain
19 chr2:210550800-210552800 Enhancers NHDF-Ad bronchial
20 chr2:210550800-210557400 Weak transcription Brain Anterior Caudate brain
21 chr2:210550800-210557400 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr2:210551000-210552200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr2:210551000-210552600 Strong transcription Cortex derived primary cultured neurospheres brain
24 chr2:210551400-210552600 Enhancers HUES48 Cell Line embryonic stem cell
25 chr2:210551400-210553600 Enhancers HMEC breast
26 chr2:210551400-210557600 Weak transcription Brain Inferior Temporal Lobe brain
27 chr2:210551400-210561400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr2:210551600-210552600 Genic enhancers Brain Germinal Matrix brain
29 chr2:210551600-210552800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr2:210551800-210552600 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr2:210551800-210552600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr2:210552000-210552400 Enhancers iPS-20b Cell Line embryonic stem cell
33 chr2:210552000-210552800 Enhancers iPS-18 Cell Line embryonic stem cell
34 chr2:210552000-210553000 Genic enhancers Fetal Brain Female brain
35 chr2:210552000-210553400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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