Variant report

Variant	rs551714768
Chromosome Location	chr11:47057457-47057458
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1805201	chr11:46971012-47063429	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	esv1819852	chr11:46971012-47064542	Enhancers Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	nsv1043108	chr11:47041565-47117248	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv312	chr11:47047247-47072397	Weak transcription Enhancers ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv508627	chr11:47052659-47084007	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	esv33095	chr11:47054281-47064767	Enhancers Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	esv3403717	chr11:47055876-47060874	Weak transcription ZNF genes & repeats Enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3507746	chr11:47056426-47060174	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3507745	chr11:47056626-47059024	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3507747	chr11:47056626-47059024	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3517629	chr11:47056901-47064924	Weak transcription ZNF genes & repeats Enhancers	TF binding region	1 gene(s)	inside rSNPs	diseases
12	esv998583	chr11:47057087-47065609	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	inside rSNPs	diseases
13	nsv512222	chr11:47057334-47064381	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	inside rSNPs	diseases
14	esv3374556	chr11:47057401-47060249	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
15	esv3517631	chr11:47057438-47063913	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	inside rSNPs	diseases
16	esv3460863	chr11:47057453-47063821	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:47026800-47080200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:47048800-47058000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
3	chr11:47053400-47077600	Weak transcription	Primary T cells from cord blood	blood
4	chr11:47055200-47057600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr11:47055200-47062000	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr11:47055400-47058200	Weak transcription	NHDF-Ad	bronchial
7	chr11:47055400-47058800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr11:47055400-47077200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr11:47055600-47077800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr11:47056200-47058400	Weak transcription	Fetal Intestine Small	intestine
11	chr11:47056400-47073600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
12	chr11:47056600-47073800	Weak transcription	Cortex derived primary cultured neurospheres	brain
13	chr11:47057000-47058600	Weak transcription	K562	blood
14	chr11:47057200-47074200	Weak transcription	Hela-S3	cervix

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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