The 2.0 version of rSNPBase

Variant report

Variant rs552046660
Chromosome Location chr8:100606269-100606270
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:100560400-100619600 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr8:100581800-100612400 Weak transcription HSMMtube muscle
3 chr8:100582000-100610400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr8:100586200-100608800 Weak transcription Stomach Smooth Muscle stomach
5 chr8:100586600-100617400 Weak transcription Fetal Kidney kidney
6 chr8:100590000-100612800 Weak transcription Brain Substantia Nigra brain
7 chr8:100590800-100610600 Weak transcription Gastric stomach
8 chr8:100591400-100609600 Weak transcription Brain Hippocampus Middle brain
9 chr8:100594800-100609000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr8:100596800-100618800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr8:100597400-100612600 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr8:100598400-100607200 Weak transcription Pancreas Pancrea
13 chr8:100598400-100608400 Weak transcription Ovary ovary
14 chr8:100598400-100611200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr8:100598400-100612000 Weak transcription Fetal Lung lung
16 chr8:100598400-100618000 Weak transcription Aorta Aorta
17 chr8:100598400-100620800 Weak transcription Muscle Satellite Cultured Cells --
18 chr8:100598400-100622800 Weak transcription Primary T cells fromperipheralblood blood
19 chr8:100598400-100631200 Weak transcription Left Ventricle heart
20 chr8:100598600-100623400 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr8:100598800-100606800 Weak transcription Liver Liver
22 chr8:100598800-100625000 Weak transcription Adipose Nuclei Adipose
23 chr8:100599000-100609400 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr8:100599000-100610200 Weak transcription Psoas Muscle Psoas
25 chr8:100599000-100611200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr8:100599000-100611600 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr8:100599000-100614800 Weak transcription Fetal Muscle Trunk muscle
28 chr8:100599400-100608200 Weak transcription Primary B cells from peripheral blood blood
29 chr8:100599400-100609400 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr8:100599400-100609800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr8:100599400-100618200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr8:100599400-100630800 Weak transcription Primary T cells from cord blood blood
33 chr8:100599400-100632400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr8:100599600-100607000 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr8:100602600-100631200 Weak transcription Primary hematopoietic stem cells blood
36 chr8:100604000-100606600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr8:100604400-100610000 Strong transcription Primary B cells from cord blood blood
38 chr8:100605000-100618000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr8:100605200-100608000 Weak transcription Fetal Muscle Leg muscle
40 chr8:100606200-100607600 Enhancers Pancreatic Islets Pancreatic Islet
41 chr8:100606200-100611400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015