Variant report

Variant	rs552061727
Chromosome Location	chr4:143639510-143639511
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830101	chr4:143518810-143684392	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv595606	chr4:143631691-143729595	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv880174	chr4:143639498-143848024	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:143620800-143642000	Weak transcription	Fetal Heart	heart
2	chr4:143625200-143641600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr4:143630200-143640600	Weak transcription	Primary T cells fromperipheralblood	blood
4	chr4:143630800-143650200	Weak transcription	Aorta	Aorta
5	chr4:143632400-143640200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr4:143635000-143648200	Weak transcription	Thymus	Thymus
7	chr4:143635600-143641000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
8	chr4:143636200-143640000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
9	chr4:143636400-143639600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
10	chr4:143636400-143641000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
11	chr4:143636600-143639800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
12	chr4:143636600-143641000	Weak transcription	Primary T cells from cord blood	blood
13	chr4:143636800-143639600	Weak transcription	Dnd41	blood
14	chr4:143637200-143653000	Weak transcription	Left Ventricle	heart
15	chr4:143637400-143640200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr4:143637400-143640600	Weak transcription	Primary hematopoietic stem cells	blood
17	chr4:143637800-143641000	Weak transcription	Primary T helper cells fromperipheralblood	blood
18	chr4:143639200-143641800	Enhancers	Primary T helper cells PMA-I stimulated	--
19	chr4:143639400-143640200	Enhancers	Primary T helper naive cells from peripheral blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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