The 2.0 version of rSNPBase

Variant report

Variant rs552503258
Chromosome Location chr8:100191719-100191720
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:100109200-100197600 Weak transcription HUVEC blood vessel
2 chr8:100109600-100198000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr8:100122000-100201200 Weak transcription Gastric stomach
4 chr8:100131800-100197600 Weak transcription Lung lung
5 chr8:100161400-100202000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr8:100163000-100197000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr8:100163000-100198800 Weak transcription HSMM muscle
8 chr8:100163200-100197800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr8:100163400-100198200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr8:100163400-100214400 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr8:100163400-100224800 Weak transcription Duodenum Mucosa Duodenum
12 chr8:100163400-100225000 Weak transcription Fetal Thymus thymus
13 chr8:100163400-100226800 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr8:100163400-100226800 Weak transcription Fetal Muscle Trunk muscle
15 chr8:100163400-100230600 Weak transcription Right Ventricle heart
16 chr8:100163600-100214200 Weak transcription Dnd41 blood
17 chr8:100163600-100214400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr8:100163800-100206600 Weak transcription GM12878-XiMat blood
19 chr8:100164000-100205000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr8:100164000-100225600 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr8:100164000-100229600 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr8:100164200-100245000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr8:100164800-100214400 Weak transcription Liver Liver
24 chr8:100165200-100206400 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr8:100166800-100194400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr8:100169800-100192600 Weak transcription Primary hematopoietic stem cells blood
27 chr8:100170200-100192400 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr8:100171200-100205000 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr8:100171400-100214400 Weak transcription Primary T cells fromperipheralblood blood
30 chr8:100173400-100192400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr8:100173400-100198200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr8:100173400-100202400 Weak transcription Muscle Satellite Cultured Cells --
33 chr8:100174800-100207800 Weak transcription Primary B cells from peripheral blood blood
34 chr8:100175400-100222800 Weak transcription Fetal Stomach stomach
35 chr8:100176200-100222600 Weak transcription Fetal Intestine Large intestine
36 chr8:100178200-100194200 Weak transcription Brain Anterior Caudate brain
37 chr8:100178800-100245000 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr8:100178800-100245000 Weak transcription Fetal Intestine Small intestine
39 chr8:100179200-100191800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr8:100179200-100199800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr8:100179200-100204800 Weak transcription Primary B cells from cord blood blood
42 chr8:100179200-100217000 Weak transcription Adipose Nuclei Adipose
43 chr8:100179200-100223000 Weak transcription Fetal Muscle Leg muscle
44 chr8:100179200-100229600 Weak transcription Fetal Lung lung
45 chr8:100179400-100197400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr8:100179400-100202600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr8:100179400-100216800 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr8:100182600-100192800 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr8:100183000-100205000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr8:100186600-100192600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015