Variant report
| Variant | rs552633090 |
|---|---|
| Chromosome Location | chr3:23282192-23282193 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:23272600-23283000 | Weak transcription | HMEC | breast |
| 2 | chr3:23274600-23283000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 3 | chr3:23274800-23298200 | Weak transcription | Aorta | Aorta |
| 4 | chr3:23278600-23289600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 5 | chr3:23278800-23283000 | Weak transcription | Left Ventricle | heart |
| 6 | chr3:23279400-23282800 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 7 | chr3:23279800-23282800 | Enhancers | Brain Angular Gyrus | brain |
| 8 | chr3:23280000-23282800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 9 | chr3:23280000-23282800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 10 | chr3:23280200-23282200 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 11 | chr3:23280200-23282200 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 12 | chr3:23280200-23282600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 13 | chr3:23280200-23282600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 14 | chr3:23280200-23282800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 15 | chr3:23280200-23291400 | Weak transcription | Psoas Muscle | Psoas |
| 16 | chr3:23280400-23290600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 17 | chr3:23280800-23282200 | Enhancers | Liver | Liver |
| 18 | chr3:23280800-23282600 | Enhancers | Brain Hippocampus Middle | brain |
| 19 | chr3:23280800-23283600 | Enhancers | Brain Anterior Caudate | brain |
| 20 | chr3:23280800-23285000 | Enhancers | Brain Cingulate Gyrus | brain |
| 21 | chr3:23281000-23282200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 22 | chr3:23281000-23282600 | Enhancers | Brain Substantia Nigra | brain |
| 23 | chr3:23281200-23282200 | Enhancers | Adipose Nuclei | Adipose |
| 24 | chr3:23281200-23282200 | Enhancers | A549 | lung |
| 25 | chr3:23281200-23282600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 26 | chr3:23281400-23282400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 27 | chr3:23281400-23282800 | Enhancers | Monocytes-CD14+_RO01746 | blood |
| 28 | chr3:23281400-23298200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 29 | chr3:23281600-23282600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 30 | chr3:23282000-23282200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 31 | chr3:23282000-23282200 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 32 | chr3:23282000-23283200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 33 | chr3:23282000-23290200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
