The 2.0 version of rSNPBase

Variant report

Variant rs553512317
Chromosome Location chr2:55622697-55622698
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55542400-55644800 Weak transcription Primary T cells from cord blood blood
2 chr2:55555200-55635800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr2:55579200-55640800 Weak transcription Fetal Brain Male brain
4 chr2:55579400-55644400 Weak transcription Primary B cells from cord blood blood
5 chr2:55579600-55632200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr2:55582000-55632400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr2:55589400-55639400 Weak transcription Aorta Aorta
8 chr2:55589600-55628800 Weak transcription Fetal Thymus thymus
9 chr2:55589600-55632200 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr2:55591000-55646000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr2:55592000-55635400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr2:55592200-55631800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr2:55592800-55626600 Weak transcription Muscle Satellite Cultured Cells --
14 chr2:55592800-55635600 Weak transcription HSMMtube muscle
15 chr2:55593200-55632600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr2:55593800-55631800 Weak transcription Brain Germinal Matrix brain
17 chr2:55599200-55626800 Weak transcription Osteobl bone
18 chr2:55600600-55631600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr2:55600800-55629400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr2:55600800-55629400 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr2:55601800-55631000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr2:55601800-55644600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr2:55602000-55629600 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr2:55602200-55629600 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr2:55602400-55629600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr2:55603600-55629400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr2:55603600-55630200 Weak transcription NH-A brain
28 chr2:55606200-55630400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr2:55608600-55630400 Weak transcription HSMM muscle
30 chr2:55612600-55629600 Weak transcription Dnd41 blood
31 chr2:55612600-55630200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr2:55612800-55632000 Weak transcription Fetal Stomach stomach
33 chr2:55614200-55632000 Weak transcription Thymus Thymus
34 chr2:55616600-55635400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr2:55616600-55635400 Weak transcription HMEC breast
36 chr2:55616800-55630200 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr2:55616800-55632200 Weak transcription Hela-S3 cervix
38 chr2:55616800-55642600 Weak transcription HUVEC blood vessel
39 chr2:55618200-55635200 Weak transcription Psoas Muscle Psoas
40 chr2:55618200-55639400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr2:55618200-55642400 Weak transcription Fetal Lung lung
42 chr2:55618400-55627000 Weak transcription Primary monocytes fromperipheralblood blood
43 chr2:55618600-55622800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr2:55618600-55636000 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr2:55618800-55626800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr2:55619000-55630200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr2:55619000-55632200 Weak transcription Fetal Muscle Leg muscle
48 chr2:55619200-55627200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr2:55619200-55629400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr2:55619200-55636800 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015