The 2.0 version of rSNPBase

Variant report

Variant rs553966947
Chromosome Location chr4:166260579-166260580
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:166249600-166266600 Weak transcription Left Ventricle heart
2 chr4:166249800-166262400 Weak transcription Placenta Amnion Placenta Amnion
3 chr4:166249800-166262600 Weak transcription Thymus Thymus
4 chr4:166250000-166264600 Weak transcription Rectal Smooth Muscle rectum
5 chr4:166250200-166260800 Weak transcription Stomach Smooth Muscle stomach
6 chr4:166250200-166262600 Weak transcription Spleen Spleen
7 chr4:166250200-166262800 Weak transcription Right Ventricle heart
8 chr4:166250200-166263800 Weak transcription Colon Smooth Muscle Colon
9 chr4:166250200-166265000 Weak transcription Psoas Muscle Psoas
10 chr4:166250200-166265200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr4:166250400-166260800 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr4:166250400-166260800 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr4:166250400-166262600 Weak transcription Aorta Aorta
14 chr4:166250600-166263200 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr4:166250600-166265400 Weak transcription Colonic Mucosa Colon
16 chr4:166250600-166266800 Weak transcription A549 lung
17 chr4:166252200-166269200 Weak transcription Stomach Mucosa stomach
18 chr4:166252200-166269400 Weak transcription Gastric stomach
19 chr4:166253400-166263000 Weak transcription Pancreas Pancrea
20 chr4:166253400-166272600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr4:166253600-166265400 Strong transcription HUES48 Cell Line embryonic stem cell
22 chr4:166253800-166265200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr4:166253800-166266600 Weak transcription Small Intestine intestine
24 chr4:166254000-166264600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr4:166254000-166264800 Weak transcription Hela-S3 cervix
26 chr4:166254000-166265200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr4:166254000-166265200 Strong transcription NHDF-Ad bronchial
28 chr4:166254000-166269400 Weak transcription Fetal Heart heart
29 chr4:166254200-166261200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr4:166254200-166264200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr4:166254200-166265200 Strong transcription Fetal Thymus thymus
32 chr4:166254400-166263200 Strong transcription H1 Cell Line embryonic stem cell
33 chr4:166254600-166265200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr4:166254600-166265400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr4:166254800-166264200 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr4:166255000-166263600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr4:166255000-166264200 Strong transcription Fetal Muscle Trunk muscle
38 chr4:166255000-166264600 Strong transcription HSMM muscle
39 chr4:166255600-166265400 Strong transcription Primary B cells from peripheral blood blood
40 chr4:166255800-166265200 Strong transcription Duodenum Mucosa Duodenum
41 chr4:166255800-166265400 Strong transcription HUVEC blood vessel
42 chr4:166255800-166266800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr4:166256400-166264600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr4:166256600-166264800 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr4:166256600-166265200 Strong transcription iPS-20b Cell Line embryonic stem cell
46 chr4:166256800-166261000 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr4:166256800-166264200 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr4:166256800-166264400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr4:166256800-166265200 Strong transcription HUES6 Cell Line embryonic stem cell
50 chr4:166256800-166265200 Strong transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015