Variant report

Variant	rs554434794
Chromosome Location	chr11:93610611-93610612
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898181	chr11:93072843-93662459	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
2	nsv898182	chr11:93381845-93637462	Strong transcription Genic enhancers Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
3	nsv508650	chr11:93609010-93713576	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93609000-93613200	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr11:93609200-93613600	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr11:93609800-93615400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr11:93610000-93611200	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr11:93610200-93613200	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr11:93610400-93612000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr11:93610600-93611200	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr11:93610600-93611400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr11:93610600-93613000	Enhancers	H1 Cell Line	embryonic stem cell
10	chr11:93610600-93613200	Enhancers	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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