The 2.0 version of rSNPBase

Variant report

Variant rs554726868
Chromosome Location chr12:63140123-63140124
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:63096600-63157000 Weak transcription Pancreas Pancrea
2 chr12:63123000-63152000 Weak transcription Gastric stomach
3 chr12:63124200-63145400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr12:63125800-63143000 Weak transcription Psoas Muscle Psoas
5 chr12:63126000-63149200 Weak transcription Lung lung
6 chr12:63126200-63155600 Weak transcription Aorta Aorta
7 chr12:63130200-63153200 Weak transcription Fetal Intestine Large intestine
8 chr12:63131400-63148000 Weak transcription Fetal Intestine Small intestine
9 chr12:63132600-63140600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr12:63132600-63145400 Weak transcription H9 Cell Line embryonic stem cell
11 chr12:63133600-63144800 Weak transcription Brain Anterior Caudate brain
12 chr12:63133800-63143000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr12:63134200-63145000 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr12:63134200-63150600 Weak transcription Right Atrium heart
15 chr12:63134400-63141400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr12:63134400-63144600 Weak transcription Brain Cingulate Gyrus brain
17 chr12:63134400-63160600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr12:63135000-63142200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr12:63135600-63145000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr12:63136000-63142600 Weak transcription Brain Angular Gyrus brain
21 chr12:63136000-63145000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr12:63136400-63144600 Weak transcription Brain Substantia Nigra brain
23 chr12:63137800-63140400 Enhancers Primary monocytes fromperipheralblood blood
24 chr12:63138200-63140200 Enhancers GM12878-XiMat blood
25 chr12:63138600-63141800 Strong transcription HepG2 liver
26 chr12:63138800-63140200 Weak transcription Esophagus oesophagus
27 chr12:63138800-63142400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr12:63138800-63149200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr12:63139000-63140600 Enhancers Monocytes-CD14+_RO01746 blood
30 chr12:63139000-63144600 Weak transcription Brain Inferior Temporal Lobe brain
31 chr12:63139000-63144800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr12:63139400-63140200 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr12:63139400-63140800 Weak transcription NHLF lung
34 chr12:63139400-63141800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr12:63139400-63150400 Weak transcription Left Ventricle heart
36 chr12:63139600-63142200 Weak transcription Osteobl bone
37 chr12:63139600-63142400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr12:63139600-63142600 Weak transcription HSMMtube muscle
39 chr12:63139600-63143000 Weak transcription Brain Hippocampus Middle brain
40 chr12:63139800-63140200 Enhancers Thymus Thymus
41 chr12:63139800-63141400 Weak transcription A549 lung
42 chr12:63139800-63142200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr12:63139800-63142400 Weak transcription HSMM muscle
44 chr12:63139800-63142600 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr12:63139800-63143000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr12:63139800-63148400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr12:63140000-63149200 Weak transcription Primary hematopoietic stem cells blood
48 chr12:63140000-63150800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr12:63140000-63168600 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015