Variant report

Variant	rs555587711
Chromosome Location	chr11:47108697-47108698
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043108	chr11:47041565-47117248	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv541032	chr11:47108596-47121969	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:47077600-47113200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:47089400-47120800	Weak transcription	Hela-S3	cervix
3	chr11:47094000-47116400	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr11:47094000-47125200	Weak transcription	Fetal Muscle Leg	muscle
5	chr11:47100800-47121000	Weak transcription	HSMMtube	muscle
6	chr11:47101400-47109000	Weak transcription	Primary hematopoietic stem cells	blood
7	chr11:47106200-47109200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr11:47106200-47109200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr11:47106200-47109400	Weak transcription	Osteobl	bone
10	chr11:47106200-47121000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr11:47107800-47110000	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr11:47108600-47110000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links